The NMPDR will be down from October 2 - 5 while the systems hosting it are moved to the new TCS building at Argonne.

Annotation Overview for fig|224308.1.peg.2880 in Bacillus subtilis subsp. subtilis str. 168:
Arabinose operon protein araL

current assignmentArabinose operon protein araL
taxonomy id224308contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
PubMed links9084180
annotation historyrun tool
FigFamFIG134892
data base cross references
(dbxref)

This feature is part of a subsystem
  • In L-Arabinose utilization its role is Arabinose operon protein araL.

    • Reasons for Current Assignment

    We have assigned the function "Arabinose operon protein araL" to the encoded protein. The protein occurs in 1 subsystem: "L-Arabinose utilization". In "L-Arabinose utilization", it appears to play a functional role that we have not associated with any other gene. The function of this gene is asserted in 9084180.

    Compare Regions

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.






    Topic revision: r6 - 02 Mar 2009 - 22:06:54 - Bruce Parrello
     
    National Microbial Pathogen Data Resource
     
    Search
    Click to log in

    NMPDR is a collaboration among researchers from the Computation Institute of the University of Chicago, the Fellowship for Interpretation of Genomes (FIG), Argonne National Laboratory, and the National Center for Supercomputing Applications (NCSA) at the University of Illinois. NMPDR is funded by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract HHSN266200400042C. Banner images are copyright © Dennis Kunkel.